Bioinformatics Lab UofL

Bioinformatics Journal Club, 2008-2009

Meeting Time: Wednesdays, 4:00 pm
Location: Access Grid Room, 2nd Floor Vogt

Bioinformatics Journals

 

DATE
SPEAKER
PAPER
9/22/2008
Dr. Eric Rouchka
Organizational Meeting
10/1/2008
Dr. Elizabeth Cha
Mackenzie KF et al. (2008) Human PDE4A8, a novel brain-expressed PDE4 cAMP-specific phosphodiesterase that has undergone rapid evolutionary change. Biochem. J. 411, 361-369.
10/8/2008
Dr. Jeff Petruska
TBA
10/15/2008
Xiang Zhang
Zhang D, Huang X, Regnier FE, Zhang M. (2008). Two-Dimensional Correlation Optimized Warping Algorithm for Aligning GCxGC-MS Data. Anal. Chem. 80:2664-2671.
10/22/2008
Chi Zhang
Thiersch M, et al. (2008) Analysis of the retinal gene expression profile after hypoxic preconditioning identifies candidate genes for neuroprotection. BMC Genomics 2008, 9:73.
10/29/2008
Chris Whitaker
Penarrubia PG, Ruiz XF, Galvez J. (2005). Quantitative Analysis of the Factors That Affect the Determination of Colocalization Coefficients in Dual-Color Confocal Images. IEEE Trans on Image Processing 14(8):1151-1158.
11/5/2008
Dr. Ming Ouyang
Wirawan A, Kwoh CK, Hieu NT, Schmidt B. (2008) CBESW: Sequence Alignment on the Playstation 3. BMC Bioinformatics 9:377
11/12/2008
Sungbo Jung
Langdon WB, Harrson WB. (2008). GP on SPMD parallel Graphics Hardware for mega Bioinformatics Data Mining. in Soft Computing - A Fusion of Foundations, Methodologies and Applications Vol.12, No.12 P.1169-1183.
11/19/2008
Dr. Ashok Kumar
12/3/2008
Dr. Jeff Petruska
1/14/2009
Dr. Eric Rouchka
1/28/2009
Dr. Elizabeth Cha

Chang Y-M, et al. (2008). Prediction of human miRNAs using tissue-selective motifs in 3' UTRs. PNAS 105(44):17061-17066./td>

2/4/2009
Rami Mahdi
Hirschhorn JN, Daly MJ. (2005). Genome-wide association studies for common diseases and complex traits. Genetics (6):95-108.
2/11/2009
Chris Whitaker
Steele MR, Inman DM, Calkins DJ, Horner PJ, Vetter ML. (2006). Microarray analysis of retinal gene expression in the DBA/2J model of glaucoma. Invest Opthalmol Vis Sci 47(3):977-985.
2/18/2009
Pingle Wang
Sequence alignments and experimental validation of CPEB3.
2/25/2009
Dr. Ted Kalbfleisch
Next Generation Sequencing: How it will change your world.
3/4/2009
Dr. Xiang Zhang
TBD
3/11/2009
Dr. Ted Kalbfleisch
TBD
3/18/2009
Spring Break
3/25/2009
Various
Recap of the bioinformatics summit.
4/1/2009
Dr. Ming Ouyang
Hill J, et al. (2008). SPRINT: A new parallel framework for R. BMC Bioinformatics 2008, 9:558.
4/8/2009
Dr. Nigel Cooper
Bioinformatics -- where are we going, where do we want to go, how do we get there?
4/15/2009
Dr. Bing Wang
TBD
4/22/2009
Christy Bogard

Ogasawara J, Morishita S. (2002). Fast and sensitive algorithm for aligning ESTs to human genome. Proceeings of the IEEE Computer Society Bioinformatics Conference 2002.

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